<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE article PUBLIC "-//NLM//DTD Journal Publishing DTD v3.0 20080202//EN" "http://dtd.nlm.nih.gov/publishing/3.0/journalpublishing3.dtd">
<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" article-type="research-article" dtd-version="3.0" xml:lang="en">
<front>
<journal-meta>
<journal-id journal-id-type="publisher">ACP</journal-id>
<journal-title-group>
<journal-title>Atmospheric Chemistry and Physics</journal-title>
<abbrev-journal-title abbrev-type="publisher">ACP</abbrev-journal-title>
</journal-title-group>
<issn pub-type="epub">1680-7324</issn>
<publisher><publisher-name>Copernicus GmbH</publisher-name>
<publisher-loc>Göttingen, Germany</publisher-loc>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.5194/acp-9-2843-2009</article-id>
<title-group>
<article-title>The Coupled Aerosol and Tracer Transport model to the Brazilian developments on the Regional Atmospheric Modeling System (CATT-BRAMS) – Part 1: Model description and evaluation</article-title>
</title-group>
<contrib-group><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Freitas</surname>
<given-names>S. R.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Longo</surname>
<given-names>K. M.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff8">
<sup>8</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Silva Dias</surname>
<given-names>M. A. F.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Chatfield</surname>
<given-names>R.</given-names>
</name>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Silva Dias</surname>
<given-names>P.</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Artaxo</surname>
<given-names>P.</given-names>
</name>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Andreae</surname>
<given-names>M. O.</given-names>
</name>
<xref ref-type="aff" rid="aff5">
<sup>5</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Grell</surname>
<given-names>G.</given-names>
</name>
<xref ref-type="aff" rid="aff6">
<sup>6</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Rodrigues</surname>
<given-names>L. F.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Fazenda</surname>
<given-names>A.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff7">
<sup>7</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Panetta</surname>
<given-names>J.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
</contrib-group><aff id="aff1">
<label>1</label>
<addr-line>Center for Weather Forecasts and Climate Studies (CPTEC), INPE, Cachoeira Paulista, Brazil</addr-line>
</aff>
<aff id="aff2">
<label>2</label>
<addr-line>Department of Atmospheric Sciences, University of São Paulo, Brazil</addr-line>
</aff>
<aff id="aff3">
<label>3</label>
<addr-line>NASA Ames Research Center, Moffett Field, USA</addr-line>
</aff>
<aff id="aff4">
<label>4</label>
<addr-line>Institute of Physics, University of São Paulo, Brazil</addr-line>
</aff>
<aff id="aff5">
<label>5</label>
<addr-line>Max Planck Institute for Chemistry, Mainz, Germany</addr-line>
</aff>
<aff id="aff6">
<label>6</label>
<addr-line>Cooperative Institute for Research in Environmental Sciences (CIRES), University of Colorado/NOAA Research-Forecast Systems Laboratory, Boulder, CO, USA</addr-line>
</aff>
<aff id="aff7">
<label>7</label>
<addr-line>Department of Computing Science, University of Taubaté, São Paulo, Brazil</addr-line>
</aff>
<aff id="aff8">
<label>8</label>
<addr-line>now at: Center for Space and Atmospheric Sciences, INPE, São José dos Campos, Brazil</addr-line>
</aff>
<pub-date pub-type="epub">
<day>28</day>
<month>04</month>
<year>2009</year>
</pub-date>
<volume>9</volume>
<issue>8</issue>
<fpage>2843</fpage>
<lpage>2861</lpage>
<permissions>
<license xlink:type="simple">
<license-p>This is an open-access article ditributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.</license-p>
</license>
</permissions>
<self-uri xlink:href="http://www.atmos-chem-phys.net/9/2843/2009/acp-9-2843-2009.html">This article is available from http://www.atmos-chem-phys.net/9/2843/2009/acp-9-2843-2009.html</self-uri>
<self-uri xlink:href="http://www.atmos-chem-phys.net/9/2843/2009/acp-9-2843-2009.pdf">The full text article is available as a PDF file from http://www.atmos-chem-phys.net/9/2843/2009/acp-9-2843-2009.pdf</self-uri>
<abstract>
<p>We introduce the Coupled Aerosol and Tracer Transport model to the Brazilian
developments on the Regional Atmospheric Modeling System (CATT-BRAMS).
CATT-BRAMS is an on-line transport model fully consistent with the simulated
atmospheric dynamics. Emission sources from biomass burning and
urban-industrial-vehicular activities for trace gases and from biomass
burning aerosol particles are obtained from several published datasets and
remote sensing information. The tracer and aerosol mass concentration
prognostics include the effects of sub-grid scale turbulence in the
planetary boundary layer, convective transport by shallow and deep moist
convection, wet and dry deposition, and plume rise associated with
vegetation fires in addition to the grid scale transport. The radiation
parameterization takes into account the interaction between the simulated
biomass burning aerosol particles and short and long wave radiation. The
atmospheric model BRAMS is based on the Regional Atmospheric Modeling System
(RAMS), with several improvements associated with cumulus convection
representation, soil moisture initialization and surface scheme tuned for
the tropics, among others. In this paper the CATT-BRAMS model is used to
simulate carbon monoxide and particulate material (PM&lt;sub&gt;2.5&lt;/sub&gt;) surface fluxes and
atmospheric transport during the 2002 LBA field campaigns, conducted during
the transition from the dry to wet season in the southwest Amazon Basin.
Model evaluation is addressed with comparisons between model results and
near surface, radiosondes and airborne measurements performed during the
field campaign, as well as remote sensing derived products. We show the
matching of emissions strengths to observed carbon monoxide in the LBA
campaign. A relatively good comparison to the MOPITT data, in spite of the
fact that MOPITT a priori assumptions imply several difficulties, is also
obtained.</p>
</abstract>
<counts><page-count count="19"/></counts>
</article-meta>
</front>
<body/>
<back>
<ref-list>
<title>References</title>
<ref id="ref1">
<label>1</label><mixed-citation publication-type="other" xlink:type="simple"> Andreae, M. O.: Biomass burning: Its history, use and distribution and its impact on environmental quality and global climate, in: Global Biomass Burning: Atmospheric, Climatic and Biospheric Implications, edited by: Levine, J. S. 3–21, MIT Press, Cambridge, Mass., 1991. </mixed-citation>
</ref>
<ref id="ref2">
<label>2</label><mixed-citation publication-type="other" xlink:type="simple"> Andreae, M., Rosenfeld, D., Artaxo, P., Costa, A., Frank, G., Longo, K. M., and Silva Dias, M. A. F.: Smoking rain clouds over the Amazon, Science, 303, 1342–1345, 2004. </mixed-citation>
</ref>
<ref id="ref3">
<label>3</label><mixed-citation publication-type="other" xlink:type="simple"> Araujo, E., Cirne, W. Wagner, G., Oliveira, N., Souza, E. P., Galvão, E. O., and Martins, E. S.: The SegHidro Experience: Using the Grid to Empower a Hydro-Meteorological Scientific Network, Proceedings of the First International Conference on e-Science and Grid Computing (e-Science&apos;05), IEEE Computer Society, 64–71, 2005. </mixed-citation>
</ref>
<ref id="ref4">
<label>4</label><mixed-citation publication-type="other" xlink:type="simple"> Artaxo, P., Martins, J., Yamasoe, M., Procópio, A., Pauliquevis, T., Andreae, M., Guyon, P., Gatti, L., and Cordova, A.: Physical and chemical properties of aerosols in the wet and dry season in Rondônia, Amazonia, J. Geophys. Res., 107(D20), 49.1–49.14, 2002. </mixed-citation>
</ref>
<ref id="ref5">
<label>5</label><mixed-citation publication-type="other" xlink:type="simple"> Berge, E.: Coupling of wet scavenging of sulphur to clouds in a numerical weather prediction model, Tellus, 45B, 1–22, 1993. </mixed-citation>
</ref>
<ref id="ref6">
<label>6</label><mixed-citation publication-type="other" xlink:type="simple"> Brazil Health: an analysis of the health situation in Brazil, Secretaria de Vigilância em Sa\&apos;ude, Departamento de Análise de Situação em Sa\&apos;ude. – Brasília : Ministério da Sa\&apos;ude, Brasil, 620 p. : il. – (Série G. Estatística e Informação em Sa\&apos;ude) ISBN 85-334-1223-1, http://portal.saude.gov.br/portal/arquivos/pdf/saude_brasil_2006.pdf, 2006. </mixed-citation>
</ref>
<ref id="ref7">
<label>7</label><mixed-citation publication-type="other" xlink:type="simple"> Brasseur, G., Hauglustaine, D., Walters, S., Rasch, P., Müller, J.-F., Granier, C., and Tie, X.: MOZART, a global chemical transport model for ozone and related chemical tracers, 1: Model description, J. Geophys. Res., 103(D21), 28265–28290, 1998. </mixed-citation>
</ref>
<ref id="ref8">
<label>8</label><mixed-citation publication-type="other" xlink:type="simple"> Chatfield, R., Guo, Z., Sachse, G., Blake, D., and Blake, N.: The subtropical global plume in the Pacific Exploratory Mission-Tropics A (PEM-Tropics A), PEM-Tropics B, and the Global Atmospheric Sampling Program (GASP): How tropical emissions affect the remote Pacific, J. Geophys. Res., 107(D16), doi:10.1029/2001JD000497, 2002. </mixed-citation>
</ref>
<ref id="ref9">
<label>9</label><mixed-citation publication-type="other" xlink:type="simple"> Chatfield, R., Vastano, J., Singh, H., and Sachse, G.: A general model of how fire emissions and chemistry produce African/oceanic plumes (O3, CO, PAN, smoke), J. Geophys. Res., 101, D19, 24279–24306, 1996. </mixed-citation>
</ref>
<ref id="ref10">
<label>10</label><mixed-citation publication-type="other" xlink:type="simple"> Chin, M., Rood, R., Lin, S.-J., Muller, J.-F., and Thompson, A.: Atmospheric sulfur cycle simulated in the global model GOCART: Model description and global properties, J. Geophys. Res., 105(D20), 24671–24688, doi:10.1029/2000JD900384, 2000. </mixed-citation>
</ref>
<ref id="ref11">
<label>11</label><mixed-citation publication-type="other" xlink:type="simple"> Cordova, A. M., Longo, K., Freitas, S., Gatti, L. V., Artaxo, P., Procópio, A., Silva Dias, M. A. F., and Freitas, E. D.: Nitrogen oxides measurements in an Amazon site and enhancements associated with a cold front, Atmos. Chem. Phys. Discuss., 4, 2301–2331, 2004. </mixed-citation>
</ref>
<ref id="ref12">
<label>12</label><mixed-citation publication-type="other" xlink:type="simple"> Deeter, M. N., Emmons, L. K., Francis, G. L., et al.: Operational carbon monoxide retrieval algorithm and selected results for the MOPITT instrument, J. Geophys. Res., 108(D14), 4399, doi:10.1029/2002JD003186, 2003. </mixed-citation>
</ref>
<ref id="ref13">
<label>13</label><mixed-citation publication-type="other" xlink:type="simple"> Deeter, M. N., Edwards, D. P, and Gille, J. C.: Retrievals of Carbon Monoxide Profiles from MOPITT Observations using Log-Normal A Priori Statistics, submitted, J. Geophys. Res., 2006. </mixed-citation>
</ref>
<ref id="ref14">
<label>14</label><mixed-citation publication-type="other" xlink:type="simple"> Fast, J. D., Gustafson Jr., W. I., Easter, R. C., et al.: Evolution of ozone, particulates, and aerosol direct radiative forcing in the vicinity of Houston using a fully coupled meteorology-chemistry-aerosol model, J. Geophys. Res., 111, D21305, doi:10.1029/2005JD006721, 2006. </mixed-citation>
</ref>
<ref id="ref15">
<label>15</label><mixed-citation publication-type="other" xlink:type="simple"> Fernandes, W. A., Pinto, I. R. C. A., Pinto Jr., O., Longo, K. M., and Freitas, S. R.: New findings about the influence of smoke from fires on the cloud-to-ground lightning characteristics in the Amazon region, Geophys. Res. Lett., 33, L20810, doi:10.1029/2006GL027744, 2006. </mixed-citation>
</ref>
<ref id="ref16">
<label>16</label><mixed-citation publication-type="other" xlink:type="simple"> Freitas, E. D., Martins, L. D., and Silva Dias, P. L.: A simple photochemical module implemented in RAMS for tropospheric ozone concentration forecast in the metropolitan area of São Paulo – Brazil, Atmos. Environ., 39, 34, 6352–6361, 2005a. </mixed-citation>
</ref>
<ref id="ref17">
<label>17</label><mixed-citation publication-type="other" xlink:type="simple"> Freitas, S. R.: Modelagem Numérica do Transporte e da Emissão de Gases Traços e Aerossóis de Queimadas no Cerrado e Floresta Tropical da América do Sul, PhD Dissertation, University of São Paulo, 1999. </mixed-citation>
</ref>
<ref id="ref18">
<label>18</label><mixed-citation publication-type="other" xlink:type="simple"> Freitas, S. R., Silva Dias, M., Silva Dias, P., Longo, K. M., Artaxo, P., Andreae, M. O., and Fischer, H.: A convective kinematic trajectory technique for low-resolution atmospheric models, J. Geophys. Res., 105, D19, 24375–24386, 2000. </mixed-citation>
</ref>
<ref id="ref19">
<label>19</label><mixed-citation publication-type="other" xlink:type="simple"> Freitas, S. R., Longo, K. M., Silva Dias, M., Silva Dias, P., Chatfield, R., Prins, E., Artaxo, P., Grell, G., and Recuero, F.: Monitoring the transport of biomass burning emissions in South America, Environmental Fluid Mechanics, doi:10.1007/s10652-005-0243-7, 5(1–2), 135–167, 2005b. </mixed-citation>
</ref>
<ref id="ref20">
<label>20</label><mixed-citation publication-type="other" xlink:type="simple"> Freitas, S. R., Longo, K. M., and Andreae, M. O.: Impact of including the plume rise of vegetation fires in numerical simulations of associated atmospheric pollutants, Geophys. Res. Lett., 33, L17808, doi:10.1029/2006GL026608, 2006. </mixed-citation>
</ref>
<ref id="ref21">
<label>21</label><mixed-citation publication-type="other" xlink:type="simple"> Freitas, S. R., Longo, K. M., Chatfield, R., Latham, D., Silva Dias, M. A. F., Andreae, M. O., Prins, E., Santos, J. C., Gielow R., and Carvalho Jr., J. A.: Including the sub-grid scale plume rise of vegetation fires in low resolution atmospheric transport models, Atmos. Chem. Phys., 7, 3385–3398, 2007. </mixed-citation>
</ref>
<ref id="ref22">
<label>22</label><mixed-citation publication-type="other" xlink:type="simple"> Fuzzi, S., Decesari, S., Facchini, M. C., et al.: Overview of the inorganic and organic composition of size-segregated aerosol in Rondônia, Brazil, from the biomass burning period to the onset of the wet season, J. Geophys. Res., 112, D01201, doi:10.1029/2005JD006741, 2007. </mixed-citation>
</ref>
<ref id="ref23">
<label>23</label><mixed-citation publication-type="other" xlink:type="simple"> Gevaerd, R. and Freitas, S. R.: Estimativa operacional da umidade do solo para iniciação de modelos de previsão numérica da atmosfera. Parte I: Descrição da metodologia e validação, Revista Brasileira de Meteorologia, 21, 3, 1–15, 2006. </mixed-citation>
</ref>
<ref id="ref24">
<label>24</label><mixed-citation publication-type="other" xlink:type="simple"> Gevaerd, R., Freitas, S. R., Longo, M., Moreira, D. S., Silva Dias, M. A., and Silva Dias, P.: Estimativa operacional da umidade do solo para iniciação de modelos de previsão numérica da atmosfera. Parte II: Impacto da umidade do solo e da parametrização de cumulus na simulação de uma linha seca. Revista Brasileira de Meteorologia, 21, 3a, 74–88, 2006a. </mixed-citation>
</ref>
<ref id="ref25">
<label>25</label><mixed-citation publication-type="other" xlink:type="simple"> Gevaerd, R., Freitas, S. R., and Longo, K. M.: Numerical simulation of biomass burning emission and transportation during 1998 Roraima fires. In: International Conference on Southern Hemisphere Meteorology and Oceanography (ICSHMO), 8., 2006, Foz do Iguaçu. Proceedings São José dos Campos: INPE, 883-889. CD-ROM. ISBN 85-17-00023-4, 2006b. </mixed-citation>
</ref>
<ref id="ref26">
<label>26</label><mixed-citation publication-type="other" xlink:type="simple"> Giglio, L., Descloitres, J., Justice, C. O., and Kaufman, Y. J.: An enhanced contextual fire detection algorithm for MODIS, Remote Sens. Environ., 87, 273–282, 2003. </mixed-citation>
</ref>
<ref id="ref27">
<label>27</label><mixed-citation publication-type="other" xlink:type="simple"> Grell, G. and Devenyi, D.: A generalized approach to parameterizing convection combining ensemble and data assimilation techniques, Geophys. Res. Lett., 29(14), doi:10.1029/2002GL015311, 2002. </mixed-citation>
</ref>
<ref id="ref28">
<label>28</label><mixed-citation publication-type="other" xlink:type="simple"> Grell, G., Emeis, S., Stockwell, W., Schoenemeyer, T., Forkel, R., Michalakes, J., Knoche, R., and Seidl, W.: Application of a multiscale, coupled MM5/chemistry model to the complex terrain of the VOTALP valley campaign, Atmos. Environ., 34(9), 1435–1453, 2000. </mixed-citation>
</ref>
<ref id="ref29">
<label>29</label><mixed-citation publication-type="other" xlink:type="simple"> Grell, G., Peckham, S., Schmitz, R., et al.: Fully coupled &quot;online&quot; chemistry within the WRF model, Atmos. Environ., 39(37), 6957–6975, 2005. </mixed-citation>
</ref>
<ref id="ref30">
<label>30</label><mixed-citation publication-type="other" xlink:type="simple"> Guyon, P., Frank, G. P., Welling, M., Chand, D., Artaxo, P., Rizzo, L., Nishioka, G., Kolle, O., Fritsch, H., Silva Dias, M. A. F., Gatti, L. V., Cordova, A. M., and Andreae, M. O.: Airborne measurements of trace gases and aerosol particle emissions from biomass burning in Amazonia, Atmos. Chem. Phys., 5, 2989–3002, 2005. </mixed-citation>
</ref>
<ref id="ref31">
<label>31</label><mixed-citation publication-type="other" xlink:type="simple"> Hodnett, M. G., Tomasella, J., and Marques Filho, A.: Comparisons of Long-term Soil Water Storage Behaviour under Pasture and Forest in Three Areas of Amazonia, in: Amazonian Deforestation and Climate, edited by: Gash, J. H. C., Nobre, C. A., Roberts, J. M., Victoria, R. L., John Wiley &amp; Sons, Chichester, Reino Unido, 57–77, 1996. </mixed-citation>
</ref>
<ref id="ref32">
<label>32</label><mixed-citation publication-type="other" xlink:type="simple"> Horowitz, L., Walters, S., Mauzerall, D., Emmons, L., Rasch, P., Granier, C., Tie, X., Lamarque, J.-F., Schultz, M., and Brasseur, G.: A global simulation of tropospheric ozone and related tracers: Description and evaluation of MOZART, version 2, J. Geophys. Res., 108(D24), 4784, doi:10.1029/2002JD002853, 2003. </mixed-citation>
</ref>
<ref id="ref33">
<label>33</label><mixed-citation publication-type="other" xlink:type="simple"> Huffman, G. J., Adler, R. F., Morrissey, M. M., Curtis, S., Joyce, R., McGavock, B., and Susskind, J.: Global precipitation at one-degree daily resolution from multi-satellite observations, J. Hydrometeorol., 2, 36–50, 2001. </mixed-citation>
</ref>
<ref id="ref34">
<label>34</label><mixed-citation publication-type="other" xlink:type="simple"> Kaufman, Y. J.: Remote Sensing of Direct and Indirect Aerosol Forcing, in: Aerosol Forcing of Climate, edited by: Charlson, R. J. and Heintzenberg, J., John Wiley &amp; Sons Ltd., 1995. </mixed-citation>
</ref>
<ref id="ref35">
<label>35</label><mixed-citation publication-type="other" xlink:type="simple"> Koren I., Kaufman, Y., Remer, L. A., and Martins, J. V.: Measurement of the Effect of Amazon Smoke on Inhibition of Cloud Formation, Science, 303, 1342–1345, 2004. </mixed-citation>
</ref>
<ref id="ref36">
<label>36</label><mixed-citation publication-type="other" xlink:type="simple"> Kuo, H. L.: Further studies of the parameterization of the influence of cumulus convection on large-scale flow, J. Atmos. Sci., 31, 1232, 1240, 1974. </mixed-citation>
</ref>
<ref id="ref37">
<label>37</label><mixed-citation publication-type="other" xlink:type="simple"> Longo, K. M., Freitas, S. R., Setzer, A., Prins, E., Artaxo, P., and Andreae, M. O.: The Coupled Aerosol and Tracer Transport model to the Brazilian developments on the Regional Atmospheric Modeling System (CATT-BRAMS) – Part 2: Model sensitivity to the biomass burning inventories, Atmos. Chem. Phys. Discuss., 7, 8571–8595, 2007. </mixed-citation>
</ref>
<ref id="ref38">
<label>38</label><mixed-citation publication-type="other" xlink:type="simple"> Longo, K. M., Freitas, S. R., Silva Dias, M., and Silva Dias, P.: Numerical modelling of the biomass-burning aerosol direct radiative effects on the thermodynamics structure of the atmosphere and convective precipitation. In: International Conference on Southern Hemisphere Meteorology and Oceanography (ICSHMO), 8, Foz do Iguaçu. Proceedings. São José dos Campos, INPE, 121–129. CD-ROM, ISBN 85-17-00023-4, 2006a. </mixed-citation>
</ref>
<ref id="ref39">
<label>39</label><mixed-citation publication-type="other" xlink:type="simple"> Longo, K. M., Freitas, S. R., Ulke, A. G., and Hierro, R. F.: Transport of biomass burning products in Southeastern South America and its relationship with the South American Low Level Jet East of the Andes. In: International Conference on Southern Hemisphere Meteorology and Oceanography (ICSHMO), 8, Foz do Iguaçu. Proceedings. São José dos Campos, INPE, 121–129, CD-ROM, ISBN 85-17-00023-4, 2006b. </mixed-citation>
</ref>
<ref id="ref40">
<label>40</label><mixed-citation publication-type="other" xlink:type="simple"> Marécal, V., Riviére, E. D., Held, G., Cautenet, S., and Freitas, S. R.: Modelling study of the impact of deep convection on the UTLS air composition – Part I: Analysis of ozone precursors, Atmos. Chem. Phys., 6, 1567–1584, 18–5, 2006. </mixed-citation>
</ref>
<ref id="ref41">
<label>41</label><mixed-citation publication-type="other" xlink:type="simple"> Marécal, V., Durry, G., Longo, K., Freitas, S., Rivière, E. D., and Pirre, M.: Mesoscale modelling of water vapour in the tropical UTLS: two case studies from the HIBISCUS campaign, Atmos. Chem. Phys., 7, 1471–1489, 2007. </mixed-citation>
</ref>
<ref id="ref42">
<label>42</label><mixed-citation publication-type="other" xlink:type="simple"> Mellor, G. L. and Yamada, T.: Development of a turbulence closure model for geophysical fluid problems, Rev. Geophys. Space Phys., 20, 851–875, 1982. </mixed-citation>
</ref>
<ref id="ref43">
<label>43</label><mixed-citation publication-type="other" xlink:type="simple"> Miranda, A. C., Miranda, H. S., Lloyd, J., et al.: Fluxes of carbon, water and energy over Brazilian cerrado: an analysis using eddy covariance and stable isotopes, Plant, Cell and Environment, 20, 315–328, 1997. </mixed-citation>
</ref>
<ref id="ref44">
<label>44</label><mixed-citation publication-type="other" xlink:type="simple"> Nobre, C. A., Fisch, G., Rocha, H. R., et al.: Observations of the Atmospheric Boundary Layer in Rondônia, in: Amazonian Deforestation and Climate, edited by: Gash, J. H. C., Nobre, C. A., Roberts, J. M., and Victoria, R. L, John Wiley &amp; Sons, Chichester, Reino Unido, 413–424, 1996. </mixed-citation>
</ref>
<ref id="ref45">
<label>45</label><mixed-citation publication-type="other" xlink:type="simple"> Prins, E., Feltz, J., Menzel, W., and Ward, D.: An overview of GOES-8 diurnal fire and smoke results for SCAR-B and 1995 fire season in South America, J. Geophys. Res., 103, D24, 31821–31835, 1998. </mixed-citation>
</ref>
<ref id="ref46">
<label>46</label><mixed-citation publication-type="other" xlink:type="simple"> Procópio, A. S., Remer L. A., Artaxo P., Kaufman Y. J., and Holben B. N.: Modeled spectral optical properties for smoke aerosols in Amazonia, Geophys. Res. Lett., 30, 24, 2265–2270, doi:10.1029/2003GL018063, 2003. </mixed-citation>
</ref>
<ref id="ref47">
<label>47</label><mixed-citation publication-type="other" xlink:type="simple"> Ramos, A. R., Freitas, S. R., Longo, K. M., et al.: Modelagem numérica do transporte de poluentes emitidos por fogos durante a onda de calor no verão de 2003, 6$^o$ Encontro Luso-Espanhol de Meteorologia, 4$^o$ Simpósio de Meteorologia e Geofísica da APMG (Associação Portuguesa de Meteorologia e Geofísica), 218–224. Sesimbra, 14–17 de Fevereiro de 2005. </mixed-citation>
</ref>
<ref id="ref48">
<label>48</label><mixed-citation publication-type="other" xlink:type="simple"> Reid, J. S. and Hobbs, P.: Physical and optical properties of young smoke from individual biomass fires in Brazil, J. Geophys. Res., 103, D24, 32013–32030, 1998a. </mixed-citation>
</ref>
<ref id="ref49">
<label>49</label><mixed-citation publication-type="other" xlink:type="simple"> Reid, J. S. and Hobbs, P.: Physical and optical properties of regional hazes dominated by smoke in Brazil, J. Geophys. Res., 103, D24, 32059–32080, 1998b. </mixed-citation>
</ref>
<ref id="ref50">
<label>50</label><mixed-citation publication-type="other" xlink:type="simple"> Remer, L. A., Ranré, D., Kaufman, Y., et al.: Algorithm for remote sensing of tropospheric aerosol from MODIS: collection 005: The theoretical basis document. http://modis-atmos.gsfc.nasa.gov/reference_atbd.php, 2006. </mixed-citation>
</ref>
<ref id="ref51">
<label>51</label><mixed-citation publication-type="other" xlink:type="simple"> Roberts, G. C., Artaxo, P., Zhou, J., Swietlicki, E., and Andreae, M. O. : Sensitivity of CCN spectra on chemical and physical properties of aerosol: A case study from the Amazon Basin, J. Geophys. Res., 107(D20), 8070, doi:10.1029/2001JD000583, 2002. </mixed-citation>
</ref>
<ref id="ref52">
<label>52</label><mixed-citation publication-type="other" xlink:type="simple"> Rosenfeld, D.: TRMM observed first direct evidence of smoke from forest fires inhibiting rainfall, Geophys. Res. Lett. 26, 20, 3101, 1999. </mixed-citation>
</ref>
<ref id="ref53">
<label>53</label><mixed-citation publication-type="other" xlink:type="simple"> Rossato, L., Alvalá, R. S., and Tomasella, J.: Climatologia da umidade do solo no Brasil, Anais do XII Congresso Brasileiro de Meteorologia, 1910–1915, 2002. </mixed-citation>
</ref>
<ref id="ref54">
<label>54</label><mixed-citation publication-type="other" xlink:type="simple"> Satyamurty, P., Nobre, C., and Silva Dias, P.: South America, in: Meteorology of the Southern Hemisphere, edited by: Karoly, D. and Vincent, D.: Meteorological Monographs, 27, 49, 119–139, Am. Meteorol. Soc., Boston, 1998. </mixed-citation>
</ref>
<ref id="ref55">
<label>55</label><mixed-citation publication-type="other" xlink:type="simple"> Seinfeld, J. and Pandis, S.: Atmospheric Chemistry and Physics, John Wiley &amp; Sons Inc., New York, 1326 pp., 1998. </mixed-citation>
</ref>
<ref id="ref56">
<label>56</label><mixed-citation publication-type="other" xlink:type="simple"> Sestini, M., Reimer, E., Valeriano, D., Alvalá, R., Mello, E., Chan, C., and Nobre, C.: Mapa de cobertura da terra da Amazônia legal para uso em modelos meteorológicos, Anais XI Simpósio Brasileiro de Sensoriamento Remoto, 2901–2906, 2003. </mixed-citation>
</ref>
<ref id="ref57">
<label>57</label><mixed-citation publication-type="other" xlink:type="simple"> Souto, R., &amp;#x00C1;vila, R., Navaux, P., Py, M. X., Maillard, N., Diverio, T., Velho, H. C., Stephany, S., Preto, A. J., Panetta, J., Rodrigues, E. R., Almeida, E. S., Silva Dias, P. L., and Gandu, A. W.: Processing Mesoscale Climatology in a Grid Environment, Proceedings of the Seventh IEEE International Symposium on Cluster Computing and the Grid – CCGrid, 2007. </mixed-citation>
</ref>
<ref id="ref58">
<label>58</label><mixed-citation publication-type="other" xlink:type="simple"> Souza, E. P.: Estudo teórico e numérico da relação entre convecção e superficies heterogênias na Região Amazônica, PhD Dissertation, University of São Paulo, 1999. </mixed-citation>
</ref>
<ref id="ref59">
<label>59</label><mixed-citation publication-type="other" xlink:type="simple"> Tremback, C., Powell, J., Cotton, W., and Pielke, R.: The forward in time upstream advection scheme: Extension to higher orders, Mon. Weather Rev., 115, 540–555, 1987. </mixed-citation>
</ref>
<ref id="ref60">
<label>60</label><mixed-citation publication-type="other" xlink:type="simple"> Tremback, C. J.: Numerical simulation of a mesoscale convective complex: model development and numerical results, Ph.D. dissertation, Atmos. Sci., No. 465, Colorado State University, Dept. of Atmospheric Science, Fort Collins, CO 80523, 1990. </mixed-citation>
</ref>
<ref id="ref61">
<label>61</label><mixed-citation publication-type="other" xlink:type="simple"> Tripoli, G. and Cotton, W.: The Colorado State University three-dimensional cloud-mesoscale model. Part I: General theoretical framework and sensitivity experiments, J. Res. Atmos., 16, 185–219, 1982. </mixed-citation>
</ref>
<ref id="ref62">
<label>62</label><mixed-citation publication-type="other" xlink:type="simple"> Vera, C., Baez, J., Douglas, M., Emmanuel, C. B., Marengo, J., Meitin, J., Nicolini, M. , Nogues-Paegle, J., Paegle, J., Penalba, O., Salio, P., Saulo, C., Silva Dias, M. A., Silva Dias, P., and Zipser, E.: The South American Low-Level Jet Experiment, B. Am. Meteorol. Soc., 87(1), 63–77, 2006. </mixed-citation>
</ref>
<ref id="ref63">
<label>63</label><mixed-citation publication-type="other" xlink:type="simple"> von Randow, C., Manzi, A. O., Kruijt, B., Oliveira, P. J., Zanchi, F. B., Silva, R. L., Hodnett, M. G., Gash, J. H. C., Elbers, J. A., Waterloo, M. J., Cardoso, F. L., and Kabat, P.: Comparative measurements and seasonal variations in energy and carbon exchange over forest and pasture in South West Amazonia, Theor. Appl. Climatol., 78(1), 5–26, 2004. </mixed-citation>
</ref>
<ref id="ref64">
<label>64</label><mixed-citation publication-type="other" xlink:type="simple"> Walko, R., Band, L., Baron, J., Kittel, F., Lammers, R., Lee, T., Ojima, D., Pielke, R., Taylor, C., Tague, C., Tremback, C., and Vidale, P.: Coupled atmosphere-biophysics-hydrology models for environmental modeling, J. Appl. Meteorol., 39, 6, 931–944, 2000. </mixed-citation>
</ref>
<ref id="ref65">
<label>65</label><mixed-citation publication-type="other" xlink:type="simple"> Wang, J., Christopher, S. A., Nair, U. S., et al..: Mesoscale modeling of Central American smoke transport to the United States: 1. &quot;Top-down&quot; assessment of emission strength and diurnal variation impacts, J. Geophys. Res., 111, D05S17, doi:10.1029/2005JD006416, 2006. </mixed-citation>
</ref>
<ref id="ref66">
<label>66</label><mixed-citation publication-type="other" xlink:type="simple"> Wesely, M. L.: Parameterizations of surface resistance to gaseous dry deposition in regional scale numerical models, Atmos. Environ., 23, 1293–1304, 1989. </mixed-citation>
</ref>
</ref-list>
</back>
</article>