<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE article PUBLIC "-//NLM//DTD Journal Publishing DTD v3.0 20080202//EN" "http://dtd.nlm.nih.gov/publishing/3.0/journalpublishing3.dtd">
<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" article-type="research-article" dtd-version="3.0" xml:lang="en">
<front>
<journal-meta>
<journal-id journal-id-type="publisher">ACP</journal-id>
<journal-title-group>
<journal-title>Atmospheric Chemistry and Physics</journal-title>
<abbrev-journal-title abbrev-type="publisher">ACP</abbrev-journal-title>
</journal-title-group>
<issn pub-type="epub">1680-7324</issn>
<publisher><publisher-name>Copernicus GmbH</publisher-name>
<publisher-loc>GÃ¶ttingen, Germany</publisher-loc>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.5194/acp-11-7875-2011</article-id>
<title-group>
<article-title>Forest-atmosphere exchange of ozone: sensitivity to very reactive biogenic VOC emissions and implications for in-canopy photochemistry</article-title>
</title-group>
<contrib-group><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Wolfe</surname>
<given-names>G. M.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Thornton</surname>
<given-names>J. A.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>McKay</surname>
<given-names>M.</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Goldstein</surname>
<given-names>A. H.</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
</contrib-group><aff id="aff1">
<label>1</label>
<addr-line>Department of Atmospheric Sciences, University of Washington, Seattle, WA, USA</addr-line>
</aff>
<aff id="aff2">
<label>2</label>
<addr-line>Department of Environmental Science, Policy, and Management, University of California, Berkeley, CA, USA</addr-line>
</aff>
<aff id="aff3">
<label>3</label>
<addr-line>now at: Department of Chemistry, University of Wisconsin, Madison, WI, USA</addr-line>
</aff>
<aff id="aff4">
<label>4</label>
<addr-line>now at: California Air Resources Board, Sacramento, CA, USA</addr-line>
</aff>
<pub-date pub-type="epub">
<day>04</day>
<month>08</month>
<year>2011</year>
</pub-date>
<volume>11</volume>
<issue>15</issue>
<fpage>7875</fpage>
<lpage>7891</lpage>
<permissions>
<license xlink:type="simple">
<license-p>This is an open-access article ditributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.</license-p>
</license>
</permissions>
<self-uri xlink:href="http://www.atmos-chem-phys.net/11/7875/2011/acp-11-7875-2011.html">This article is available from http://www.atmos-chem-phys.net/11/7875/2011/acp-11-7875-2011.html</self-uri>
<self-uri xlink:href="http://www.atmos-chem-phys.net/11/7875/2011/acp-11-7875-2011.pdf">The full text article is available as a PDF file from http://www.atmos-chem-phys.net/11/7875/2011/acp-11-7875-2011.pdf</self-uri>
<abstract>
<p>Understanding the fate of ozone within and above forested environments is
vital to assessing the anthropogenic impact on ecosystems and air quality at
the urban-rural interface. Observed forest-atmosphere exchange of ozone is
often much faster than explicable by stomatal uptake alone, suggesting the
presence of additional ozone sinks within the canopy. Using the Chemistry of
Atmosphere-Forest Exchange (CAFE) model in conjunction with summer noontime
observations from the 2007 Biosphere Effects on Aerosols and Photochemistry
Experiment (BEARPEX-2007), we explore the viability and implications of the
hypothesis that ozonolysis of very reactive but yet unidentified biogenic
volatile organic compounds (BVOC) can influence the forest-atmosphere
exchange of ozone. Non-stomatal processes typically generate 67 % of the
observed ozone flux, but reactions of ozone with measured BVOC, including
monoterpenes and sesquiterpenes, can account for only 2 % of this flux
during the selected timeframe. By incorporating additional emissions and
chemistry of a proxy for very reactive VOC (VRVOC) that undergo rapid
ozonolysis, we demonstrate that an in-canopy chemical ozone sink of ~2 Ã— 10&lt;sup&gt;8&lt;/sup&gt; molec cm&lt;sup&gt;âˆ’3&lt;/sup&gt; s&lt;sup&gt;âˆ’1&lt;/sup&gt; can close the ozone flux budget. Even in
such a case, the 65 min chemical lifetime of ozone is much longer than
the canopy residence time of ~2 min, highlighting that chemistry
can influence reactive trace gas exchange even when it is &quot;slow&quot; relative
to vertical mixing. This level of VRVOC ozonolysis could enhance OH and
RO&lt;sub&gt;2&lt;/sub&gt; production by as much as 1 pptv s&lt;sup&gt;âˆ’1&lt;/sup&gt; and substantially alter
their respective vertical profiles depending on the actual product yields.
Reaction products would also contribute significantly to the oxidized VOC
budget and, by extension, secondary organic aerosol mass. Given the
potentially significant ramifications of a chemical ozone flux for both
in-canopy chemistry and estimates of ozone deposition, future efforts should
focus on quantifying both ozone reactivity and non-stomatal (e.g. cuticular)
deposition within the forest.</p>
</abstract>
<counts><page-count count="17"/></counts>
</article-meta>
</front>
<body/>
<back>
<ref-list>
<title>References</title>
<ref id="ref1">
<label>1</label><mixed-citation publication-type="other" xlink:type="simple"> Altimir, N., Tuovinen, J. P., Vesala, T., Kulmala, M., and Hari, P.: Measurements of ozone removal by Scots pine shoots: calibration of a stomatal uptake model including the non-stomatal component, Atmos. Environ., 38, 2387â€“2398, 2004. </mixed-citation>
</ref>
<ref id="ref2">
<label>2</label><mixed-citation publication-type="other" xlink:type="simple"> Altimir, N., Kolari, P., Tuovinen, J.-P., Vesala, T., Bäck, J., Suni, T., Kulmala, M., and Hari, P.: Foliage surface ozone deposition: a role for surface moisture?, Biogeosciences, 3, 209â€“228, http://dx.doi.org/10.5194/bg-3-209-2006doi:10.5194/bg-3-209-2006, 2006. </mixed-citation>
</ref>
<ref id="ref3">
<label>3</label><mixed-citation publication-type="other" xlink:type="simple"> Aschmann, S. M., Arey, J., and Atkinson, R.: OH radical formation from the gas-phase reactions of O&lt;sub&gt;3&lt;/sub&gt; with a series of terpenes, Atmos. Environ., 36, 4347â€“4355, 2002. </mixed-citation>
</ref>
<ref id="ref4">
<label>4</label><mixed-citation publication-type="other" xlink:type="simple"> Ashmore, M. R.: Assessing the future global impacts of ozone on vegetation, Plant Cell Environ., 28, 949â€“964, 2005. </mixed-citation>
</ref>
<ref id="ref5">
<label>5</label><mixed-citation publication-type="other" xlink:type="simple"> Atkinson, R. and Arey, J.: Gas-phase tropospheric chemistry of biogenic volatile organic compounds: a review, Atmos. Environ., 37, S197â€“S219, 2003. </mixed-citation>
</ref>
<ref id="ref6">
<label>6</label><mixed-citation publication-type="other" xlink:type="simple"> Baldocchi, D.: A Multi-Layer Model for Estimating Sulfur Dioxide Deposition to a Deciduous Oak Forest Canopy, Atmos. Environ., 22, 869â€“884, 1988. </mixed-citation>
</ref>
<ref id="ref7">
<label>7</label><mixed-citation publication-type="other" xlink:type="simple"> Bassin, S., Calanca, P., Weidinger, T., Gerosa, G., and Fuhrer, E.: Modeling seasonal ozone fluxes to grassland and wheat: model improvement, testing, and application, Atmos. Environ., 38, 2349â€“2359, 2004. </mixed-citation>
</ref>
<ref id="ref8">
<label>8</label><mixed-citation publication-type="other" xlink:type="simple"> Bouvier-Brown, N. C., Goldstein, A. H., Gilman, J. B., Kuster, W. C., and de Gouw, J. A.: In-situ ambient quantification of monoterpenes, sesquiterpenes, and related oxygenated compounds during BEARPEX 2007: implications for gas- and particle-phase chemistry, Atmos. Chem. Phys., 9, 5505-5518, http://dx.doi.org/10.5194/acp-9-5505-2009doi:10.5194/acp-9-5505-2009, 2009a. </mixed-citation>
</ref>
<ref id="ref9">
<label>9</label><mixed-citation publication-type="other" xlink:type="simple"> Bouvier-Brown, N. C., Holzinger, R., Palitzsch, K., and Goldstein, A. H.: Large emissions of sesquiterpenes and methyl chavicol quantified from branch enclosure measurements, Atmos. Environ., 43, 389â€“401, 2009b. </mixed-citation>
</ref>
<ref id="ref10">
<label>10</label><mixed-citation publication-type="other" xlink:type="simple"> Bouvier-Brown, N. C., Schade, G. W., Misson, L., Lee, A., McKay, M., and Goldstein, A. H.: Contributions of biogenic volatile organic compounds to net ecosystem carbon flux, J. Geophys. Res., in review, 2011. </mixed-citation>
</ref>
<ref id="ref11">
<label>11</label><mixed-citation publication-type="other" xlink:type="simple"> Bytnerowicz, A. and Fenn, M. E.: Nitrogen deposition in California forests: a review, Environ. Pollut., 92, 127â€“146, 1996. </mixed-citation>
</ref>
<ref id="ref12">
<label>12</label><mixed-citation publication-type="other" xlink:type="simple"> Bytnerowicz, A., Arbaugh, M., Schilling, S., Fraczek, W., and Alexander, D.: Ozone distribution and phytotoxic potential in mixed conifer forests of the San Bernardino Mountains, Southern California, Environ. Pollut., 155, 398â€“408, 2008. </mixed-citation>
</ref>
<ref id="ref13">
<label>13</label><mixed-citation publication-type="other" xlink:type="simple"> Cahill, T. M., Seaman, V. Y., Charles, M. J., Holzinger, R., and Goldstein, A. H.: Secondary organic aerosols formed from oxidation of biogenic volatile organic compounds in the Sierra Nevada Mountains of California, J. Geophys. Res., 111, D16312, 10.1029/2006JD007178, 2006. </mixed-citation>
</ref>
<ref id="ref14">
<label>14</label><mixed-citation publication-type="other" xlink:type="simple"> Calogirou, A., Larsen, B. R., and Kotzias, D.: Gas-phase terpene oxidation products: a review, Atmos. Environ., 33, 1423â€“1439, 1999. </mixed-citation>
</ref>
<ref id="ref15">
<label>15</label><mixed-citation publication-type="other" xlink:type="simple"> Cantrell, C. A., Lind, J. A., Shetter, R. E., Calvert, J. G., Goldan, P. D., Kuster, W., Fehsenfeld, F. C., Montzka, S. A., Parrish, D. D., Williams, E. J., Buhr, M. P., Westberg, H. H., Allwine, G., and Martin, R.: Peroxy-radicals in the Rose experiment â€“ measurement and theory, J. Geophys. Res.-Atmos., 97, 20671â€“20686, 1992. </mixed-citation>
</ref>
<ref id="ref16">
<label>16</label><mixed-citation publication-type="other" xlink:type="simple"> Cape, J. N., Hamilton, R., and Heal, M. R.: Reactive uptake of ozone at simulated leaf surfaces: Implications for &apos;non-stomatal&apos; ozone flux, Atmos. Environ., 43, 1116â€“1123, 2009. </mixed-citation>
</ref>
<ref id="ref17">
<label>17</label><mixed-citation publication-type="other" xlink:type="simple"> Choi, W., Faloona, I. C., Bouvier-Brown, N. C., McKay, M., Goldstein, A. H., Mao, J., Brune, W. H., LaFranchi, B. W., Cohen, R. C., Wolfe, G. M., Thornton, J. A., Sonnenfroh, D. M., and Millet, D. B.: Observations of elevated formaldehyde over a forest canopy suggest missing sources from rapid oxidation of arboreal hydrocarbons, Atmos. Chem. Phys., 10, 8761â€“8781, http://dx.doi.org/10.5194/acp-10-8761-2010doi:10.5194/acp-10-8761-2010, 2010. </mixed-citation>
</ref>
<ref id="ref18">
<label>18</label><mixed-citation publication-type="other" xlink:type="simple"> Coe, H., Gallagher, M. W., Choularton, T. W., and Dore, C.: Canopy Scale Measurements Of Stomatal And Cuticular O&lt;sub&gt;3&lt;/sub&gt; Uptake By Sitka Spruce, Atmos. Environ., 29, 1413â€“1423, 1995. </mixed-citation>
</ref>
<ref id="ref19">
<label>19</label><mixed-citation publication-type="other" xlink:type="simple"> Darrall, N. M.: The effect of air pollutants on physiological processes in plants, Plants, Cell and Environment, 12, 1â€“30, 1989. </mixed-citation>
</ref>
<ref id="ref20">
<label>20</label><mixed-citation publication-type="other" xlink:type="simple"> DiGangi, J. P., Boyle, E. S., Karl, T., Harley, P., Turnipseed, A., Kim, S., Cantrell, C., Maudlin III, R. L., Zheng, W., Flocke, F., Hall, S. R., Ullmann, K., Nakashima, Y., Paul, J. B., Wolfe, G. M., Desai, A. R., Kajii, Y., Guenther, A., and Keutsch, F. N.: First direct measurements of formaldehyde flux via eddy covariance: implications for missing in-canopy formaldehyde sources, Atmos. Chem. Phys. Discuss., 11, 18729â€“18766, http://dx.doi.org/10.5194/acpd-11-18729-2011doi:10.5194/acpd-11-18729-2011, 2011. </mixed-citation>
</ref>
<ref id="ref21">
<label>21</label><mixed-citation publication-type="other" xlink:type="simple"> Dillon, M. B., Lamanna, M. S., Schade, G. W., Goldstein, A., and Cohen, R. C.: Chemical evolution of the Sacramento urban plume: Transport and oxidation, J. Geophys. Res., 107, 4045, 10.1029/2001JD000969, 2002. </mixed-citation>
</ref>
<ref id="ref22">
<label>22</label><mixed-citation publication-type="other" xlink:type="simple"> Dorsey, J. R., Duyzer, J. H., Gallagher, M. W., Coe, H., Pilegaard, K., Weststrate, J. H., Jensen, N. O., and Walton, S.: Oxidized nitrogen and ozone interaction with forests. I: Experimental observations and analysis of exchange with Douglas fir, Q. J. Roy. Meteor. Soc., 130, 1941â€“1955, 2004. </mixed-citation>
</ref>
<ref id="ref23">
<label>23</label><mixed-citation publication-type="other" xlink:type="simple"> Duyzer, J. H., Dorsey, J. R., Gallagher, M. W., Pilegaard, K., and Walton, S.: Oxidized nitrogen and ozone interaction with forests. II: Multi-layer process-oriented modelling results and a sensitivity study for Douglas fir, Q. J. Roy. Meteor. Soc., 130, 1957â€“1971, 2004. </mixed-citation>
</ref>
<ref id="ref24">
<label>24</label><mixed-citation publication-type="other" xlink:type="simple"> Faloona, I., Tan, D., Brune, W., Hurst, J., Barket, D., Couch, T. L., Shepson, P., Apel, E., Riemer, D., Thornberry, T., Carroll, M. A., Sillman, S., Keeler, G. J., Sagady, J., Hooper, D., and Paterson, K.: Nighttime observations of anomalously high levels of hydroxyl radicals above a deciduous forest canopy, J. Geophys. Res.-Atmos., 106, 24315â€“24333, 2001. </mixed-citation>
</ref>
<ref id="ref25">
<label>25</label><mixed-citation publication-type="other" xlink:type="simple"> Fares, S., McKay, M., Holzinger, R., and Goldstein, A. H.: Ozone fluxes in a Pinus ponderosa ecosystem are dominated by non-stomatal processes: Evidence from long-term continuous measurements, Agr. Forest Meteorol., 150, 42â€“431, 2010a. </mixed-citation>
</ref>
<ref id="ref26">
<label>26</label><mixed-citation publication-type="other" xlink:type="simple"> Fares, S., Park, J. H., Ormeno, E., Gentner, D. R., McKay, M., Loreto, F., Karlik, J., and Goldstein, A. H.: Ozone uptake by citrus trees exposed to a range of ozone concentrations, Atmos. Environ., 44, 3404â€“3412, 2010b. </mixed-citation>
</ref>
<ref id="ref27">
<label>27</label><mixed-citation publication-type="other" xlink:type="simple"> Farmer, D. K. and Cohen, R. C.: Observations of HNO&lt;sub&gt;3&lt;/sub&gt;, $Â§igma $AN, $Â§igma$PN and NO&lt;sub&gt;2&lt;/sub&gt; fluxes: evidence for rapid HO$_x$ chemistry within a pine forest canopy, Atmos. Chem. Phys., 8, 3899â€“3917, http://dx.doi.org/10.5194/acp-8-3899-2008doi:10.5194/acp-8-3899-2008, 2008. </mixed-citation>
</ref>
<ref id="ref28">
<label>28</label><mixed-citation publication-type="other" xlink:type="simple"> Farmer, D. K., Kimmel, J. R., Phillips, G., Docherty, K. S., Worsnop, D. R., Sueper, D., Nemitz, E., and Jimenez, J. L.: Eddy covariance measurements with high-resolution time-of-flight aerosol mass spectrometry: a new approach to chemically resolved aerosol fluxes, Atmos. Meas. Tech., 4, 1275â€“1289, http://dx.doi.org/10.5194/amt-4-1275-2011doi:10.5194/amt-4-1275-2011, 2011. </mixed-citation>
</ref>
<ref id="ref29">
<label>29</label><mixed-citation publication-type="other" xlink:type="simple"> Fowler, D., Pilegaard, K., Sutton, M. A., Ambus, P., Raivonen, M., Duyzer, J., Simpson, D., Fagerli, H., Fuzzi, S., Schjoerring, J. K., Granier, C., Neftel, A., Isaksen, I. S. A., Laj, P., Maione, M., Monks, P. S., Burkhardt, J., Daemmgen, U., Neirynck, J., Personne, E., Wichink-Kruit, R., Butterbach-Bahl, K., Flechard, C., Tuovinen, J. P., Coyle, M., Gerosa, G., Loubet, B., Altimir, N., Gruenhage, L., Ammann, C., Cieslik, S., Paoletti, E., Mikkelsen, T. N., Ro-Poulsen, H., Cellier, P., Cape, J. N., Horvath, L., Loreto, F., Niinemets, U., Palmer, P. I., Rinne, J., Misztal, P., Nemitz, E., Nilsson, D., Pryor, S., Gallagher, M. W., Vesala, T., Skiba, U., Brueggemann, N., Zechmeister-Boltenstern, S., Williams, J., O&apos;Dowd, C., Facchini, M. C., de Leeuw, G., Flossman, A., Chaumerliac, N., and Erisman, J. W.: Atmospheric composition change: Ecosystems-Atmosphere interactions, Atmos. Environ., 43, 5193â€“5267, 2009. </mixed-citation>
</ref>
<ref id="ref30">
<label>30</label><mixed-citation publication-type="other" xlink:type="simple"> Gao, W., Wesely, M. L., and Doskey, P. V.: Numerical modeling of the turbulent diffusion and chemistry of NO&lt;sub&gt;x&lt;/sub&gt;, O&lt;sub&gt;3&lt;/sub&gt;, isoprene, and other reactive trace gases in and above a forest canopy, J. Geophys. Res., 98, 18339â€“18353, 1993. </mixed-citation>
</ref>
<ref id="ref31">
<label>31</label><mixed-citation publication-type="other" xlink:type="simple"> Glowacki, D. R. and Pilling, M. J.: Unimolecular Reactions of Peroxy Radicals in Atmospheric Chemistry and Combustion, Chemphyschem, 11, 3836â€“3843, 2010. </mixed-citation>
</ref>
<ref id="ref32">
<label>32</label><mixed-citation publication-type="other" xlink:type="simple"> Goldstein, A. H., Hultman, N. E., Fracheboud, J. M., Bauer, M. R., Panek, J. A., Xu, M., Qi, Y., Guenther, A. B., and Baugh, W.: Effects of climate variability on the carbon dioxide, water, and sensible heat fluxes above a ponderosa pine plantation in the Sierra Nevada (CA), Agr. Forest Meteorol., 101, 113â€“129, 2000. </mixed-citation>
</ref>
<ref id="ref33">
<label>33</label><mixed-citation publication-type="other" xlink:type="simple"> Goldstein, A. H., McKay, M., Kurpius, M. R., Schade, G. W., Lee, A., Holzinger, R., and Rasmussen, R. A.: Forest thinning experiment confirms ozone deposition to forest canopy is dominated by reaction with biogenic VOCs, Geophys. Res. Lett., 31, L22106, 10.1029/2004GL021259, 2004. </mixed-citation>
</ref>
<ref id="ref34">
<label>34</label><mixed-citation publication-type="other" xlink:type="simple"> Goumenaki, E., Taybi, T., Borland, A., and Barnes, J.: Mechanisms underlying the impacts of ozone on photosynthetic performance, Environmental And Experimental Botany, 69, 259â€“266, 2010. </mixed-citation>
</ref>
<ref id="ref35">
<label>35</label><mixed-citation publication-type="other" xlink:type="simple"> Guenther, A., Hewitt, C. N., Erickson, D., Fall, R., Geron, C., Graedel, T., Harley, P., Klinger, L., Lerdau, M. T., McKay, W. A., Pierce, T., Scholes, B., Steinbrecher, R., Tallamraju, R., Taylor, J., and Zimmerman, P.: A global model of natural volatile organic compound emissions, J. Geophys. Res., 100, 8873â€“8892, 1995. </mixed-citation>
</ref>
<ref id="ref36">
<label>36</label><mixed-citation publication-type="other" xlink:type="simple"> Hallquist, M., Wenger, J. C., Baltensperger, U., Rudich, Y., Simpson, D., Claeys, M., Dommen, J., Donahue, N. M., George, C., Goldstein, A. H., Hamilton, J. F., Herrmann, H., Hoffmann, T., Iinuma, Y., Jang, M., Jenkin, M. E., Jimenez, J. L., Kiendler-Scharr, A., Maenhaut, W., McFiggans, G., Mentel, Th. F., Monod, A., PrÃ©vÃ´t, A. S. H., Seinfeld, J. H., Surratt, J. D., Szmigielski, R., and Wildt, J.: The formation, properties and impact of secondary organic aerosol: current and emerging issues, Atmos. Chem. Phys., 9, 5155â€“5236, http://dx.doi.org/10.5194/acp-9-5155-2009doi:10.5194/acp-9-5155-2009, 2009. </mixed-citation>
</ref>
<ref id="ref37">
<label>37</label><mixed-citation publication-type="other" xlink:type="simple"> Helmig, D., Daly, R., and Bertman, S. B.: Ozone reactivity of biogenic volatile organic compounds emitted from the four dominant tree species at PROPHET - CABINEX, AGU Fall Meeting, San Francisco, CA, 2010, Abstract A53C-0240, </mixed-citation>
</ref>
<ref id="ref38">
<label>38</label><mixed-citation publication-type="other" xlink:type="simple"> Herrmann, F., Winterhalter, R., Moortgat, G. K., and Williams, J.: Hydroxyl radical (OH) yields from the ozonolysis of both double bonds for five monoterpenes, Atmos. Environ., 44, 3458â€“3464, 2010. </mixed-citation>
</ref>
<ref id="ref39">
<label>39</label><mixed-citation publication-type="other" xlink:type="simple"> Hogg, A., Uddling, J., Ellsworth, D., Carroll, M. A., Pressley, S., Lamb, B., and Vogel, C.: Stomatal and non-stomatal fluxes of ozone to a northern mixed hardwood forest, Tellus B, 59, 514â€“525, 2007. </mixed-citation>
</ref>
<ref id="ref40">
<label>40</label><mixed-citation publication-type="other" xlink:type="simple"> Holzinger, R., Lee, A., Paw, K. T., and Goldstein, U. A. H.: Observations of oxidation products above a forest imply biogenic emissions of very reactive compounds, Atmos. Chem. Phys., 5, 67â€“75, http://dx.doi.org/10.5194/acp-5-67-2005doi:10.5194/acp-5-67-2005, 2005. </mixed-citation>
</ref>
<ref id="ref41">
<label>41</label><mixed-citation publication-type="other" xlink:type="simple"> Jenkin, M. E., Saunders, S. M., and Pilling, M. J.: The tropospheric degradation of volatile organic compounds: A protocol for mechanism development, Atmos. Environ., 31, 81â€“104, 1997. </mixed-citation>
</ref>
<ref id="ref42">
<label>42</label><mixed-citation publication-type="other" xlink:type="simple"> Karl, T., Harley, P., Guenther, A., Rasmussen, R., Baker, B., Jardine, K., and Nemitz, E.: The bi-directional exchange of oxygenated VOCs between a loblolly pine (\textitPinus taeda) plantation and the atmosphere, Atmos. Chem. Phys., 5, 3015â€“3031, http://dx.doi.org/10.5194/acp-5-3015-2005doi:10.5194/acp-5-3015-2005, 2005. </mixed-citation>
</ref>
<ref id="ref43">
<label>43</label><mixed-citation publication-type="other" xlink:type="simple"> Karl, T., Harley, P., Emmons, L., Thornton, B., Guenther, A., Basu, C., Turnipseed, A., and Jardine, K.: Efficient Atmospheric Cleansing of Oxidized Organic Trace Gases by Vegetation, Science, 330, 816â€“819, 2010. </mixed-citation>
</ref>
<ref id="ref44">
<label>44</label><mixed-citation publication-type="other" xlink:type="simple"> Karnosky, D. F., Mankovska, B., Percy, K., Dickson, R. E., Podila, G. K., Sober, J., Noormets, A., Hendrey, G., Coleman, M. D., Kubiske, M., Pregitzer, K. S., and Isebrands, J. G.: Effects of tropospheric O&lt;sub&gt;3&lt;/sub&gt; on trembling aspen and interaction with CO2: Results from an O&lt;sub&gt;3&lt;/sub&gt;-gradient and a face experiment, Water Air Soil Poll., 116, 311â€“322, 1999. </mixed-citation>
</ref>
<ref id="ref45">
<label>45</label><mixed-citation publication-type="other" xlink:type="simple"> Kurpius, M. R. and Goldstein, A. H.: Gas-phase chemistry dominates O&lt;sub&gt;3&lt;/sub&gt; loss to a forest, implying a source of aerosols and hydroxyl radicals to the atmosphere, Geophys. Res. Lett., 30, 1371â€“1374, 10.1029/2002GL016785, 2003. </mixed-citation>
</ref>
<ref id="ref46">
<label>46</label><mixed-citation publication-type="other" xlink:type="simple"> LaFranchi, B. W., Wolfe, G. M., Thornton, J. A., Harrold, S. A., Browne, E. C., Min, K. E., Wooldridge, P. J., Bilman, J. B., Kuster, W. C., Goldan, P. D., de Gouw, J. A., McKay, M., Goldstein, A. H., Ren, X., Mao, J., and Cohen, R. C.: Closing the peroxy acetyl nitrate budget: observations of acyl peroxy nitrates (PAN, PPN, and MPAN) during BEARPEX 2007, Atmos. Chem. Phys., 9, 7623-7641, 2009. </mixed-citation>
</ref>
<ref id="ref47">
<label>47</label><mixed-citation publication-type="other" xlink:type="simple"> Lee, A., Goldstein, A. H., Keywood, M. D., Gao, S., Varutbangkul, V., Bahreini, R., Ng, N. L., Flagan, R. C., and Seinfeld, J. H.: Gas-phase products and secondary aerosol yields from the ozonolysis of ten different terpenes, J. Geophys. Res., 111, 1â€“18, http://dx.doi.org/10.1029/2005JD006437doi:10.1029/2005JD006437, 2006a. </mixed-citation>
</ref>
<ref id="ref48">
<label>48</label><mixed-citation publication-type="other" xlink:type="simple"> Lee, A., Goldstein, A. H., Kroll, J. H., Ng, N. L., Varutbangkul, V., Flagan, R. C., and Seinfeld, J. H.: Gas-phase products and secondary aerosol yields from the photooxidation of 16 different terpenes, J. Geophys. Res., 111, 1â€“25, 10.1029/2006JD007050, 2006b. </mixed-citation>
</ref>
<ref id="ref49">
<label>49</label><mixed-citation publication-type="other" xlink:type="simple"> Matyssek, R., and Innes, J. L.: Ozone â€“ A risk factor for trees and forests in Europe?, Water Air Soil Poll., 116, 199â€“226, 1999. </mixed-citation>
</ref>
<ref id="ref50">
<label>50</label><mixed-citation publication-type="other" xlink:type="simple"> Matyssek, R., Wieser, G., Ceulemans, R., Rennenberg, H., Pretzsch, H., Haberer, K., Low, M., Nunn, A. J., Werner, H., Wipfler, P., Osswaldg, W., Nikolova, P., Hanke, D. E., Kraigher, H., Tausz, M., Bahnweg, G., Kitao, M., Dieler, J., Sandermann, H., Herbinger, K., Grebenc, T., Blumenrother, M., Deckmyn, G., Grams, T. E. E., Heerdt, C., Leuchner, M., Fabian, P., and Haberle, K. H.: Enhanced ozone strongly reduces carbon sink strength of adult beech (Fagus sylvatica) â€“ Resume from the free-air fumigation study at Kranzberg Forest, Environ. Pollut., 158, 2527-2-532, 2010. </mixed-citation>
</ref>
<ref id="ref51">
<label>51</label><mixed-citation publication-type="other" xlink:type="simple"> Monteith, J. L. and Unsworth, M. H.: Principles of Environmental Physics, 2nd ed., Edward Arnold, London, UK, 1990. </mixed-citation>
</ref>
<ref id="ref52">
<label>52</label><mixed-citation publication-type="other" xlink:type="simple"> Paulson, S. E., Chung, M., Sen, A. D., and Orzechowska, G.: Measurement of OH radical formation from the reaction of ozone with several biogenic alkenes, J. Geophys. Res.-Atmos., 103, 25533â€“25539, 1998. </mixed-citation>
</ref>
<ref id="ref53">
<label>53</label><mixed-citation publication-type="other" xlink:type="simple"> Paulson, S. E., Chung, M. Y., and Hasson, A. S.: OH radical formation from the gas-phase reaction of ozone with terminal alkenes and the relationship between structure and mechanism, J. Phys. Chem. A, 103, 8125â€“8138, 1999. </mixed-citation>
</ref>
<ref id="ref54">
<label>54</label><mixed-citation publication-type="other" xlink:type="simple"> Perring, A. E., Bertram, T. H., Wooldridge, P. J., Fried, A., Heikes, B. G., Dibb, J., Crounse, J. D., Wennberg, P. O., Blake, N. J., Blake, D. R., Brune, W. H., Singh, H. B., and Cohen, R. C.: Airborne observations of total RONO&lt;sub&gt;2&lt;/sub&gt;: new constraints on the yield and lifetime of isoprene nitrates, Atmos. Chem. Phys., 9, 1451â€“1463, http://dx.doi.org/10.5194/acp-9-1451-2009doi:10.5194/acp-9-1451-2009, 2009. </mixed-citation>
</ref>
<ref id="ref55">
<label>55</label><mixed-citation publication-type="other" xlink:type="simple"> Qi, B., Takami, A., and Hatakeyama, S.: Peroxy radical concentrations measured at a forest canopy in Nikko, Japan, in summer 2002, J. Atmos. Chem., 52, 63â€“79, 2005. </mixed-citation>
</ref>
<ref id="ref56">
<label>56</label><mixed-citation publication-type="other" xlink:type="simple"> Raupach, M. R.: A practical Lagrangian method for relating scalar concentrations to source distributions in vegetation canopies, Q. J. Roy. Meteor. Soc., 115, 609â€“632, 1989. </mixed-citation>
</ref>
<ref id="ref57">
<label>57</label><mixed-citation publication-type="other" xlink:type="simple"> Rollins, A. W., Kiendler-Scharr, A., Fry, J. L., Brauers, T., Brown, S. S., Dorn, H.-P., DubÃ©, W. P., Fuchs, H., Mensah, A., Mentel, T. F., Rohrer, F., Tillmann, R., Wegener, R., Wooldridge, P. J., and Cohen, R. C.: Isoprene oxidation by nitrate radical: alkyl nitrate and secondary organic aerosol yields, Atmos. Chem. Phys., 9, 6685â€“6703, http://dx.doi.org/10.5194/acp-9-6685-2009doi:10.5194/acp-9-6685-2009, 2009. </mixed-citation>
</ref>
<ref id="ref58">
<label>58</label><mixed-citation publication-type="other" xlink:type="simple"> Rondon, A., Johansson, C., and Granat, L.: Dry Deposition Of Nitrogen-Dioxide And Ozone To Coniferous Forests, J. Geophys. Res.-Atmos., 98, 5159â€“5172, 1993. </mixed-citation>
</ref>
<ref id="ref59">
<label>59</label><mixed-citation publication-type="other" xlink:type="simple"> Saunders, S. M., Jenkin, M. E., Derwent, R. G., and Pilling, M. J.: Protocol for the development of the Master Chemical Mechanism, MCM v3 (Part A): tropospheric degradation of non-aromatic volatile organic compounds, Atmos. Chem. Phys., 3, 161â€“180, http://dx.doi.org/10.5194/acp-3-161-2003doi:10.5194/acp-3-161-2003, 2003. </mixed-citation>
</ref>
<ref id="ref60">
<label>60</label><mixed-citation publication-type="other" xlink:type="simple"> Schade, G. W. and Goldstein, A. H.: Fluxes of oxygenated volatile organic compounds from a ponderosa pine plantation, J. Geophys. Res., 106, 3111â€“3123, 2001. </mixed-citation>
</ref>
<ref id="ref61">
<label>61</label><mixed-citation publication-type="other" xlink:type="simple"> Schade, G. W. and Goldstein, A. H.: Plant physiological influences on the fluxes of oxygenated volatile organic compounds from ponderosa pine trees, J. Geophys. Res.-Atmos., 107, 4082â€“4091, 2002. </mixed-citation>
</ref>
<ref id="ref62">
<label>62</label><mixed-citation publication-type="other" xlink:type="simple"> Schwede, D., Zhang, L., Vet, R., and Lear, G.: An intercomparison of the deposition models used in the CASTNET and CAPMoN networks, Atmos. Environ., 45, 1337â€“1346, http://dx.doi.org/10.1016/j.atmosenv.2010.11.050doi:10.1016/j.atmosenv.2010.11.050, 2011. </mixed-citation>
</ref>
<ref id="ref63">
<label>63</label><mixed-citation publication-type="other" xlink:type="simple"> Shu, Y. and Atkinson, R.: Rate Constants for the Gas-Phase Reactions of O&lt;sub&gt;3&lt;/sub&gt; with a Series of Terpenes and OH Radical Formation from the O&lt;sub&gt;3&lt;/sub&gt; Reactions with Sesquiterpenes at 296 Â± 2 K, Int. J. Chem. Kinet., 26, 1193â€“1205, 1994. </mixed-citation>
</ref>
<ref id="ref64">
<label>64</label><mixed-citation publication-type="other" xlink:type="simple"> Stevenson, D. S., Dentener, F. J., Schultz, M. G., Ellingsen, K., van Noije, T. P. C., Wild, O., Zeng, G., Amann, M., Atherton, C. S., Bell, N., Bergmann, D. J., Bey, I., Butler, T., Cofala, J., Collins, W. J., Derwent, R. G., Doherty, R. M., Drevet, J., Eskes, H. J., Fiore, A. M., Gauss, M., Hauglustaine, D. A., Horowitz, L. W., Isaksen, I. S. A., Krol, M. C., Lamarque, J. F., Lawrence, M. G., Montanaro, V., Muller, J. F., Pitari, G., Prather, M. J., Pyle, J. A., Rast, S., Rodriguez, J. M., Sanderson, M. G., Savage, N. H., Shindell, D. T., Strahan, S. E., Sudo, K., and Szopa, S.: Multimodel ensemble simulations of present-day and near-future tropospheric ozone, J. Geophys. Res.-Atmos., 111, D08301, http://dx.doi:10.1029/2005JD006338doi:10.1029/2005JD006338, 2006. </mixed-citation>
</ref>
<ref id="ref65">
<label>65</label><mixed-citation publication-type="other" xlink:type="simple"> Stroud, C., Makar, P., Karl, T., Guenther, A., Geron, C., Turnipseed, A. A., Nemitz, E., Baker, B., Potosnak, M., and Fuentes, J. D.: Role of canopy-scale photochemistry in modifying biogenic-atmosphere exchange of reactive terpenoid species: Results from the CELTIC field study, J. Geophys. Res., 110, D17303, 10.1029/2005JD005775, 2005. </mixed-citation>
</ref>
<ref id="ref66">
<label>66</label><mixed-citation publication-type="other" xlink:type="simple"> Tan, D., Faloona, I., Simpas, J. B., Brune, W., Shepson, P. B., Couch, T. L., Sumner, A. L., Carroll, M. A., Thornberry, T., Apel, E., Riemer, D., and Stockwell, W.: HOx budgets in a deciduous forest: Results from the PROPHET summer 1998 campaign, J. Geophys. Res.-Atmos., 106, 24407â€“24427, 2001. </mixed-citation>
</ref>
<ref id="ref67">
<label>67</label><mixed-citation publication-type="other" xlink:type="simple"> Thom, A. S.: Momentum, mass and heat exchange of plant communities, in: Vegetation and Atmosphere, edited by: Monteith, J. L., Elsevier, New York, NY, 57â€“109, 1975. </mixed-citation>
</ref>
<ref id="ref68">
<label>68</label><mixed-citation publication-type="other" xlink:type="simple"> UNECE: Manual on methodologies and criteria for modelling and mapping critical loads &amp; levels and air pollution effects, risks and trends, available at: www.icpmapping.org, 2004. </mixed-citation>
</ref>
<ref id="ref69">
<label>69</label><mixed-citation publication-type="other" xlink:type="simple"> Villanueva-Fierro, I., Popp, C. J., and Martin, R. S.: Biogenic emissions and ambient concentrations of hydrocarbons, carbonyl compounds and organic acids from ponderosa pine and cottonwood trees at rural and forested sites in Central New Mexico, Atmos. Environ., 38, 249â€“260, 2004. </mixed-citation>
</ref>
<ref id="ref70">
<label>70</label><mixed-citation publication-type="other" xlink:type="simple"> Walton, S., Gallagher, M. W., and Duyzer, J. H.: Use of a detailed model to study the exchange of NO&lt;sub&gt;x&lt;/sub&gt; and O&lt;sub&gt;3&lt;/sub&gt; above and below a deciduous canopy, Atmos. Environ., 31, 2915â€“2931, 1997. </mixed-citation>
</ref>
<ref id="ref71">
<label>71</label><mixed-citation publication-type="other" xlink:type="simple"> Wesely, M. L.: Parameterization of surface resistances to gaseous dry deposition in regional-scale numerical models, Atmos. Environ., 23, 1293â€“1304, 1989. </mixed-citation>
</ref>
<ref id="ref72">
<label>72</label><mixed-citation publication-type="other" xlink:type="simple"> Wesely, M. L. and Hicks, B. B.: A review of the current status of knowledge on dry deposition, Atmos. Environ., 34, 2261â€“2282, 2000. </mixed-citation>
</ref>
<ref id="ref73">
<label>73</label><mixed-citation publication-type="other" xlink:type="simple"> Winterhalter, R., Herrmann, F., Kanawati, B., Nguyen, T. L., Peeters, J., Vereecken, L., and Moortgat, G. K.: The gas-phase ozonolysis of beta-caryophyllene (C15H24). Part I: an experimental study, Phys. Chem. Chem. Phys., 11, 4152â€“4172, 2009. </mixed-citation>
</ref>
<ref id="ref74">
<label>74</label><mixed-citation publication-type="other" xlink:type="simple"> Wolfe, G. M. and Thornton, J. A.: The Chemistry of Atmosphere-Forest Exchange (CAFE) Model - Part 1: Model description and characterization, Atmos. Chem. Phys., 11, 77â€“101, http://dx.doi.org/10.5194/acp-11-77-2011doi:10.5194/acp-11-77-2011, 2011. </mixed-citation>
</ref>
<ref id="ref75">
<label>75</label><mixed-citation publication-type="other" xlink:type="simple"> Wolfe, G. M., Thornton, J. A., Bouvier-Brown, N. C., Goldstein, A. H., Park, J.-H., McKay, M., Matross, D. M., Mao, J., Brune, W. H., LaFranchi, B. W., Browne, E. C., Min, K.-E., Wooldridge, P. J., Cohen, R. C., Crounse, J. D., Faloona, I. C., Gilman, J. B., Kuster, W. C., de Gouw, J. A., Huisman, A., and Keutsch, F. N.: The Chemistry of Atmosphere-Forest Exchange (CAFE) Model - Part 2: Application to BEARPEX-2007 observations, Atmos. Chem. Phys., 11, 1269â€“1294, http://dx.doi.org/10.5194/acp-11-1269-2011doi:10.5194/acp-11-1269-2011, 2011. </mixed-citation>
</ref>
<ref id="ref76">
<label>76</label><mixed-citation publication-type="other" xlink:type="simple"> Yi, C.: Momentum Transfer within Canopies, J. Appl. Meteorol. Clim., 47, 262â€“275, 10.1175/2007JAMC1667.1, 2008. </mixed-citation>
</ref>
<ref id="ref77">
<label>77</label><mixed-citation publication-type="other" xlink:type="simple"> Zapletal, M., Cudlin, P., Chroust, P., Urban, O., Pokorny, R., Edwards-Jonasova, M., Czerny, R., Janous, D., Taufarova, K., Vecera, Z., Mikuska, P., and Paoletti, E.: Ozone flux over a Norway spruce forest and correlation with net ecosystem production, Environ. Pollut., 159, 1024â€“1034, 2011. </mixed-citation>
</ref>
<ref id="ref78">
<label>78</label><mixed-citation publication-type="other" xlink:type="simple"> Zhang, L., Brook, J. R., and Vet, R.: A revised parameterization for gaseous dry deposition in air-quality models, Atmos. Chem. Phys., 3, 2067â€“2082, http://dx.doi.org/10.5194/acp-3-2067-2003doi:10.5194/acp-3-2067-2003, 2003. </mixed-citation>
</ref>
<ref id="ref79">
<label>79</label><mixed-citation publication-type="other" xlink:type="simple"> Zhang, L. M., Brook, J. R., and Vet, R.: On ozone dry deposition â€“ with emphasis on non-stomatal uptake and wet canopies, Atmos. Environ., 36, 4787â€“4799, 2002. </mixed-citation>
</ref>
<ref id="ref80">
<label>80</label><mixed-citation publication-type="other" xlink:type="simple"> Zheng, Y., Shimizu, H., and Barnes, J. D.: Limitations to CO&lt;sub&gt;2&lt;/sub&gt; assimilation in ozone-exposed leaves of plantago major, New Phytologist, 155, 67â€“68, 2002. </mixed-citation>
</ref>
</ref-list>
</back>
</article>